# Rust extraction-kernel migration plan + post-kernel roadmap **Audience:** the agent/engineer executing the native-kernel project. Self-contained handoff: context, current state, per-language tracker, gates, and the follow-on roadmap. **Companion:** `docs/design/native-extraction-kernel.md` (architecture + spike detail). **Written:** 2026-06-12 planning → executed 2026-07-16/17. **R1–R6 ARE DONE.** The shipped records live in §3a and §4a–§4f; the per-language tracker is current; §0a is the cold-start handoff for the next session. Read §0 + §0a first — parts of §1/§6 below them are the ORIGINAL plan and carry expectations that measurement later corrected (each is annotated where superseded). --- ## 0. Status checklist (R1–R6 done; what remains) - [x] **R1. Scaffold the napi-rs crate** — done 2026-07-16, §3a. Buffer contract v1, routing + per-file wasm fallback, kill switch, build/release wiring, grammar-source-parity CI. - [x] **R2. Port TypeScript/JavaScript (tsx/jsx)** — done 2026-07-16, §4a. The generic `.scm` emitter was SUPERSEDED by bespoke per-language walkers (queries can't express extraction parity); byte-parity from day one of the harness. - [x] **R3. TS/JS equivalence gate → DEFAULT-ON** — done 2026-07-16, §4b. Dumps byte-identical (express/excalidraw/vscode + flask control). Found + fixed: encoding-dependent error recovery → per-file `defer:` policy. - [x] **R4. Java (incl. Lombok synthesis) → DEFAULT-ON** — done 2026-07-16, §4c. dubbo 441k-row dump byte-identical. Found + fixed: node-ID-collision dedupe (cross-language). Found: many-core parse-loop wall is NOT extraction (→ §4d). - [x] **Direct-to-store decode** — done 2026-07-16, §4d. Main thread never materializes nodes; measured: the many-core fresh-index wall is single-writer SQLite ingest (94% of dubbo's parse-loop) — a store-architecture arc, out of scope here. - [x] **R5. Python + Go → DEFAULT-ON** — done 2026-07-16, §4e. django 360.8k / prometheus 213.8k row dumps byte-identical; 2-CPU envelope 1.32× / 1.46×. - [x] **R6. Kernel-scale re-validation (cg1212)** — done 2026-07-17, §4f. No regression (26.4min vs ~27min, identical 2.05M-node graph). The "parse 6m→2m" premise was wrong for THIS repo: the Linux tree is ~99% C (unported T2) — the expectation transfers to the C/C++ port. **Open, in recommended order (rationale in §0a):** - [x] **O1. Merge the `rust-kernel` branch** — DONE 2026-07-17: PR #1326, **merge commit** (the integration-branch exception — 9 milestone commits preserved), main tip `c1dc78d`. Suite green pre-merge (2,472 passed / 4 skipped, `CODEGRAPH_KERNEL_EXPECT=1`). - [x] **O2. Windows VM validation** — DONE 2026-07-17. Guest (ARM64 Win11): rustc 1.97.1 aarch64-pc-windows-msvc + MSVC Build Tools (VCTools workload + VC.Tools.ARM64 + Win11 SDK; installed via **scheduled task** — Windows sshd kills detached children on session close, `schtasks` is the survival pattern). `build-kernel.sh --target aarch64-pc-windows-msvc` builds native win32-arm64 in ~2min; **all three kernel suites green with `CODEGRAPH_KERNEL_EXPECT=1` (33/33)**. The leg EARNED ITS KEEP: the guest's autocrlf checkout exposed a real CRLF parity bug (docstring cleaning; JS multiline `^` anchors after `\r` — §0a traps) — fixed + CRLF fixtures pinned cross-platform in #1329. Every prebuild target platform is now validated. - [ ] **P1. Kernel-scale resolution speed** (§7a) — measurement round RUN 2026-07-17 and it RESHAPED the arc (full record §7a.1); items (1) WAL containment and (2) memory-aware/cgroup-honest sizing **SHIPPED same day (#1332–#1335, §7a.2)** after an implementation arc whose three failed/diagnostic kernel-scale runs each corrected the design (WAL file ≠ WAL backlog; cgroup cache credit; pool net-negative at 2 cores; parse floor). The 2c/6GB envelope already improved 26.4 → 21.6min with counts byte-exact. Record runs DONE (§7a.2): 2c/6GB 20.4min, 8c/7GB 18.3min NO-OOM — byte-exact. Batch-loop profile round DONE (§7a.3, #1339): countGuard quadratic killed, 19.3min. cFnPtr round DONE (§7a.4, #1341): 2.07× standalone, edge set hash-identical, envelope **17.6min (R6 −33%)**. R7a landed 2026-07-17: envelope now **19.1min on a substantially RICHER graph** (the new preParse blanks recover previously-error-swallowed code; wasm-arm on the same graph is 22.9min — the 17.6 record was the old smaller graph and isn't directly comparable). 8c re-run DONE post-R7a (§7a.5): **16.4min** (pre-R7a record 18.3min), EXIT 0, counts == both 2c arms, WAL 1.34GB. The <10min-on-8c target remains open, and the re-run re-ranked the levers honestly: at 8c the parse-loop (202.6s) is already AT the single-writer floor, so **the target gap is ~entirely the core-invariant resolution superphase (715s ≈ 12 of the 16.4min) — the per-ref path is THE 8c lever**. C/C++ deferral round 2 DONE 2026-07-18 (full record: checklist doc): eight new C-only preParse passes + word-list extensions took kernel/+mm/ deferral **58.6% → 33.9%** (git 16.1 → 12.2%, redis 25.3 → 24.1%, fmt/protobuf unchanged — cpp-dominant, correct no-op), five-repo sweeps 0-diff, linux full-tree both arms **2,049,153 / 6,413,518** with **byte-identical dumps** (10,446,478 lines, sha `6dd1185b…`); kernel-arm parse-loop **356 → 306s** at 2c, envelope ~17.1min (host-contaminated, indicative). Honesty note: full-graph node deltas are small (+858) — wasm error recovery was already salvaging most SYMBOLS on deferred files; the real win is EDGES (+6,585), phantom cleanup, and native-path coverage. Remaining deferral is policy-skips (CONFIG interleaves, TP_PROTO DSL, module_init-no-semi) + small buckets — this lever is largely SPENT. Per-ref measurement round DONE 2026-07-18 (§7a.6): fresh 2c/8c stage tables; the pool double-buffer WORKS (8c settle 3.6s — "core-invariant" superseded); 2c record now 16.5min, 8c range 15.0–16.4 (n=2). Two cache experiments killed by measurement same-day (nameCache scaling, lazy candidates — §7a.6 has the numbers; code reverted). Writes-under-readers PROBED + FIXED 2026-07-18 (§7a.7): mechanism = WAL read-through depth under reader pins (proven by pool-off/dose/ valve discrimination); fix = worker connection recycling at the pool-idle boundary (cadence 8); superphase **715 → 633.6s (−11.4%)**, 8c envelope best **14.8min**, byte-neutral at every gate. Queue now: **cFnPtr native site extraction** (synthesis ~230s) > continuous-shallow WAL (the remaining ~45s to the valve floor) > backpressure byte volume > recreate. - [x] **R7a. C/C++ port** — DONE 2026-07-17, same-day walker+gates after the survey (#1344) and grammar vendoring (#1345). One dual-language walker (`codegraph-kernel/src/ccpp/`), preParse HOISTED to the route point (both tryKernelExtract and the raw bulk path — no blanking ported to Rust; Metal/CUDA ride the cpp route through the same hoist). Gates: parity sweeps **0 diffs** on redis/git/fmt/protobuf/ALS (2,389 files compared); full-init dump-diffs **byte-identical** on all five; DEFAULT_ROUTED += c, cpp. Three measurement corrections recorded in the checklist doc: (1) C/C++ parse-error incidence is 9–42% per repo (vs 0–0.42% for prior languages), so erroring-file deferral is routine, not a broken-kernel signal — the sweep gained `--max-deferral` (0.5 for c/cpp) after confirming recovery-divergence is real with the sweep-only no-defer hatch; (2) seven new/extended TS-side preParse blanks (extern-C guard bodies, lone macro lines, statement iterator macros, trailing `UNUSED` params, the curated Linux/sparse `__init`-family annotations + `container_of` type args, cpp leading-attr, directive-line restore) cut real incidence (linux subtrees 79% → 58%) AND grew the wasm path's own graphs (git 7.1k → 13.3k nodes) — so cg1212's "counts must stay 2,048,664/6,405,964" expectation is superseded: the graph legitimately changes with the blanks; the invariant is kernel-arm == wasm-arm at every scale (held: five byte-identical dumps + the linux dump-hash pair); (3) at high deferral the kernel arm initially LOST arm-vs-arm on linux (deferred files ran the pipeline 3×) — fixed with the one-slot defer memo + blanked-source reuse; final cg1212 envelope **19.1 min kernel-arm** (parse-loop 560 → 356s; R6 26.4 → P1 17.6 on the old smaller graph → 19.1 on the new richer one: 2,048,295 nodes / 6,406,933 edges, two runs byte-same). - [ ] **R7b. Remaining long tail** per the tracker (§4) — ruby/php/csharp/rust/… T1s are now ~1-day-each with the walker pattern; T3 may stay TS forever (fine). - [ ] **P2. Arc 3, graph richness** (§7b) — product-priority call, standard gates. - [ ] **P3. Parked items** (§7c) — only with explicit maintainer approval. ## 0a. Cold-start handoff (state as of 2026-07-17) **Where the work lives:** MERGED to `main` 2026-07-17 (PR #1326, merge commit `c1dc78d`; the 9 milestone commits `c5eebe6` R1 → `2a79432` R6 are preserved in history). All scratchpad clones (excalidraw/vscode/dubbo/django/…) were throwaway; re-clone fresh for new gate runs. The cg1212 docker container (Linux kernel, 2 CPU/6GB) is long-lived on the dev Mac and has the current build deployed at `/app` (tree at `/work/linux`). **What exists:** - `codegraph-kernel/` — napi-rs crate. One WALKER MODULE per language (`tsjs/`, `java.rs`, `python.rs`, `go.rs`, `ccpp/` for c+cpp) mirroring `TreeSitterExtractor`'s per-language paths bug-for-bug; shared `buffers.rs` (wire contract — twin of `src/extraction/kernel/layout.ts`, byte-matched, ABI-versioned), `ids.rs` (sha node ids, test-pinned to `generateNodeId`), `docstring.rs`, `textutil.rs` (UTF-16 columns/slices, generated-file patterns, shared regexes), `langs.rs` (grammar registry). - `src/extraction/kernel/` — loader (contract-verifies before routing; a stale .node silently degrades to wasm; `CODEGRAPH_KERNEL_DEBUG=1` explains), decode, routing (`DEFAULT_ROUTED` = ts/tsx/js/jsx/java/python/go/c/cpp; `CODEGRAPH_KERNEL_LANGS` REPLACES the set; `CODEGRAPH_KERNEL=0` kills), the deferred-decode transport (`tryKernelExtractRaw` → buffers ride to the store worker; files with applicable framework `extract()` hooks keep the decoded path), and the **preParse hoist** (`preParsedSource` — a language's offset-preserving `preParse` hook runs before BOTH kernel entry points, so c/cpp/metal/cuda blanking stays TS-side and both arms parse identical bytes). - Gates in-repo: `scripts/kernel-parity.mjs` (per-file kernel↔wasm diff, ORDER-sensitive, full-object; deferral-rate guard), `scripts/dump-graph.mjs` (natural-key full-DB dump for the byte-identical diff), `__tests__/kernel-{scaffold,grammar-parity,tsjs-parity}.test.ts` (+ torture fixtures under `__tests__/fixtures/kernel-parity/`) — all in `npm test`; the release workflow builds a 6-target prebuild matrix (continue-on-error; kernel is optional everywhere) and runs the suites with `CODEGRAPH_KERNEL_EXPECT=1`. **Build/run:** `npm run build:kernel` (needs rustup; stages `codegraph-kernel/prebuilds/-/codegraph-kernel.node`) → `npm run build` → `npm test`. Parity sweep: `node scripts/kernel-parity.mjs `. Dump gate: init twice (kernel arm vs `CODEGRAPH_KERNEL=0`), `dump-graph.mjs` each, `cmp`. **Adding a language (the proven recipe, ~a day for a T1):** 1. Read its `languages/.ts` config AND every branch of tree-sitter.ts it exercises (visitNode dispatch, extractCall's language branch, inheritance clauses, fn-ref spec in function-ref.ts, value-ref prune cases). Port bug-for-bug — quirks included (each walker's header comments list its own). 2. Add the crates.io grammar; **vendor the wasm from the SAME tag** (clone tag, sha-match parser.c against the cargo registry copy, `tree-sitter-cli 0.25.10 build --wasm` from CHECKED-IN parser.c, drop into `src/extraction/wasm/`, add to VENDORED_WASM_LANGS) — tree-sitter-wasms is 2023-era for most languages. 3. Torture fixture + parity sweeps (small/medium/large real repos) → full-init dump-diffs byte-identical → add to DEFAULT_ROUTED + tests + changelog. **Traps already paid for (do not relearn):** - **Error recovery is ENCODING-dependent** (UTF-8 native vs UTF-16 web-tree-sitter, same grammar bytes + same core) → every walker defers `has_error()` files via the `defer:` signal. Incidence 0–0.42%; the harness fails >10% deferral. - **Node IDs collide** for same-(kind,name,line) — routine in minified one-liners. Any dedupe/self-check that the TS side keys on node IDs must compare ID STRINGS, not table rows (`node_ids` vec in every walker). - **Positions and JS string slices are UTF-16** (`textutil::col16`/`slice_utf16`) — that's what web-tree-sitter reports and what `.slice(0,100)` means. - The extraction seam contract is **exactly what extractFromSource returns** — e.g. refs carry NO denormalized filePath/language (the store fills them). The strict full-object parity compare exists because a loose one masked precisely this. - Grammar bumps: crate + vendored wasm move TOGETHER or kernel-grammar-parity fails. - **JS multiline `^` anchors after `\r` (and U+2028/U+2029); the regex crate's `(?m)^` is `\n`-only** — on CRLF checkouts (Windows autocrlf) the JS reference's greedy `\s*` eats the `\n` of a CRLF pair and the cleaned docstring keeps a bare `\r`. Caught by the O2 Windows leg (6 parity failures), fixed via `js_multiline_strip` in `docstring.rs`; CRLF variants of every torture fixture are pinned in `kernel-tsjs-parity` (derived in-memory — normalization-proof). Any future walker regex with `(?m)` needs the same scrutiny. - Perf claims: measure before believing — the plan's own §1/§6 expectations were corrected twice (many-core parse-loop wall = store-writer, §4d; cg1212 parse = C-bound, §4f). --- ## 1. Mission and the numbers that motivate it CodeGraph's remaining fresh-index gap vs codebase-memory-mcp (cbm) is the parse+extract phase, and its floor is per-node JS↔WASM marshaling — proven, not suspected: | Measurement (2026-07-16, M3 Pro) | Result | |---|---| | dubbo (4,402 Java files) parse-loop, current 7-wasm-worker pipeline | 4,700ms | | Same files, Rust tree-sitter parse+walk, rayon (spike) | **202ms** | | Same, single Rust thread | 1,067ms | | dubbo fresh init today / cbm | 11.1s / 7.1s (1.55×) | | Linux kernel, same 2-CPU/6GB container | **we complete 27min; cbm dies at 0.16%, twice** | Spike source: session scratchpad `cg-kernel-spike/` (tree-sitter 0.25 + tree-sitter-java, TreeCursor walk touching kind/range/name-field, flat-row output). Reproduce before starting — it's ~80 lines and doubles as the emitter's seed. Expected end state: parse-loop 4.7s → ~1.0–1.5s on dubbo-class repos → total ≈ 7.5s, **parity with cbm on their best surface**, while keeping every win we already hold (sync 2.4–2.8×, agent A/B decisive, call-graph density 1.3–2.3×, byte-identical determinism, constrained-hardware envelope). > **SUPERSEDED BY MEASUREMENT (§4c/§4d):** the many-core parse-loop wall turned out > to be the single-writer SQLite ingest (94% of it on dubbo), not extraction — 8 wasm > workers already hid extraction CPU behind the main thread on big-core machines. So > the Mac dubbo total stays ~11s and closing the remaining cbm gap there is a > STORE-ARCHITECTURE arc, not a kernel task. The kernel's wins are real where worker > CPU binds: the 2-CPU/6GB CI envelope (excalidraw ~1.5×, dubbo ~1.25×, django 1.32×, > prometheus 1.46×) and vscode-scale-on-Mac (1.28×). Every "keep" item held — > byte-identical determinism is now enforced per language by the dump gate. ## 2. What the kernel is — and the boundary that makes it safe One napi-rs crate (`codegraph-kernel`) linking tree-sitter's C library and native grammars. Input `(filePath, content, language)` per file; output **flat typed buffers** (nodes, edges, unresolved refs) — one boundary crossing per file. It replaces ONLY the parse+extract walk inside the parse workers, behind the existing `ExtractionResult` contract. **Never ported (works unchanged for all languages from day one):** name-matcher + import-resolver, all framework resolvers (`src/resolution/frameworks/`), all 36 synthesis passes, MCP/explore, sync/watcher, installer. They consume the graph and raw source, not the parse tree. **Coexistence is permanent:** a language routes to the kernel only after its gate passes; everything else stays on the wasm path forever if need be. No flag-day. Rollback per language = flipping the route. **Distribution:** prebuilt `.node` per platform through the existing release-bundle pipeline (`scripts/build-bundle.sh` + per-platform npm packages); the same crate compiled to wasm is the universal fallback. Zero-native-build-on-install stays true. ## 3. Phase 0 — scaffold (do first, ~days) 1. `codegraph-kernel/` crate: napi-rs, tree-sitter C, rayon optional (workers already parallelize per-file — start synchronous per call, one kernel call per file from the existing `ParseWorkerPool` workers; do NOT rebuild the pool). 2. Buffer contract: decide the flat encoding (suggest: one `Buffer` per table, fixed-width rows + a string arena; version byte first). Write the TS decoder next to `parse-worker.ts`. 3. Generic emitter driven by per-language `.scm` query files + a small per-language Rust config (node-kind → NodeKind mapping, name-field conventions). Escape hatch: a per-language `post(buffers, source)` TS hook for logic queries can't express. 4. Build integration: napi prebuilds wired into the release workflow next to the Node bundles; `CODEGRAPH_KERNEL=0` kill switch; wasm fallback auto-selected when the `.node` is absent (source runs, unsupported platforms). 5. CI: assert native grammars and wasm grammars are built from the SAME grammar source revisions (ABI drift between paths would make per-language routing non-deterministic). ### 3a. Phase 0 — SHIPPED 2026-07-16 (what exists and the decisions made) - **Crate:** `codegraph-kernel/` (napi 3, tree-sitter 0.25, no CLI dependency — `scripts/build-kernel.sh` does cargo build + stage into `codegraph-kernel/prebuilds/-/codegraph-kernel.node`; `npm run build:kernel`). Exports `extractFile`, `contractInfo`, `grammarInfo`. - **Buffer contract v1:** five Buffers (meta/nodes/edges/refs/arena), fixed-width LE rows, string arena with `(offset,len)` refs, `0xFFFFFFFF` = absent, version byte first, node IDs computed Rust-side (sha256, byte-identical to `generateNodeId` — pinned by test), tri-state bool flags, `extraJson` escape slot per node row, and a RESERVED u32 metrics slot (Arc 3.2). Layout doc lives twice and must match: `codegraph-kernel/src/buffers.rs` ↔ `src/extraction/kernel/layout.ts`. NODE_KINDS/EDGE_KINDS array ORDER in src/types.ts is wire contract now (EDGE_KINDS became a runtime array for this). - **Emitter:** generic, `.scm`-driven (`@def.` + `@name` + `@ref.` capture convention), scope stack by byte-range nesting → `::`-joined qualifiedNames, contains edges, refs attached to innermost enclosing def (file node fallback) — the TreeSitterExtractor conventions. Seed TS/JS queries are SMOKE-level only; R2 replaces. - **Routing:** inside `extractFromSource` (tree-sitter.ts) — `tryKernelExtract` first, wasm `TreeSitterExtractor` as fallback (also per-FILE fallback on any kernel error). DEFAULT_ROUTED is EMPTY; dev opt-in via `CODEGRAPH_KERNEL_LANGS=`; global kill switch `CODEGRAPH_KERNEL=0`; loader verifies ABI + kind tables before routing (stale .node → silent wasm, `CODEGRAPH_KERNEL_DEBUG=1` to see why). The escape hatch landed as `post(result, source)` over the DECODED result (not raw buffers) — decoded is what TS logic wants; see POST_PASSES in `src/extraction/kernel/index.ts`. - **Grammar parity (the §3.5 CI) — and a decision that changed the wasm path:** the parity test (`__tests__/kernel-grammar-parity.test.ts`, behavioral: ABI + node-kind + field tables compared id-by-id) caught on day one that tree-sitter-wasms ships 2023-era TS/JS grammars (^0.20.x) vs crates.io current. Resolution: **vendored fresh wasm into `src/extraction/wasm/` built from the exact crate revisions** — tree-sitter-typescript v0.23.2 (f975a62) for typescript+tsx, tree-sitter-javascript v0.25.0 (44c892e) for javascript+jsx — from each repo's CHECKED-IN parser.c (no `generate`), tree-sitter-cli 0.25.10, emcc. So the production wasm TS/JS grammars are UPGRADED as of this change (full suite green, 2456 tests) and **R2/R3 parity diffs are grammar-neutral**. Bump crate + vendored wasm together, or the parity test fails. - **Release wiring:** `kernel` matrix job in release.yml (macos-14 ×2 targets, ubuntu-22.04, ubuntu-22.04-arm, windows-latest ×2 — all continue-on-error: kernel is optional, a toolchain flake never blocks a release) → artifacts → `release/kernel/` → build-bundle.sh stages `lib/kernel/codegraph-kernel.node` when present. The release job runs the kernel tests with `CODEGRAPH_KERNEL_EXPECT=1` (missing binary = FAILURE there, skip elsewhere). - **Loader search order:** `CODEGRAPH_KERNEL_PATH` → `/kernel/` (bundle) → `/codegraph-kernel/prebuilds/-/` (source runs). - **Known R2 gate item:** native columns are UTF-8 byte offsets; web-tree-sitter's are UTF-16-derived — column NUMBERS on non-ASCII lines will differ in parity dumps (text, lines, IDs unaffected). Classify or normalize when it shows up. **RESOLVED in R2:** the walker emits UTF-16 columns natively (util::col16), and JS string-slicing semantics (signature truncation at 100/80/120 units) are reproduced in UTF-16 units too — no column/slice diff class exists. ### 4a. R2 — TS/JS port SHIPPED 2026-07-16 (and a §3 design revision) - **The generic `.scm` emitter is superseded.** Real TS/JS parity needs logic queries can't express (extractCall's receiver-qualified callees, store/RTK/component recognition, fn-ref capture+gating, value-ref shadow pruning, docstring wrapper climbs) — so R2 replaced the R1 query emitter with a **bespoke per-language walker** (`codegraph-kernel/src/tsjs/`, ~1,900 lines) that mirrors `TreeSitterExtractor`'s TS/JS paths function-for-function, bug-for-bug. emitter.rs + queries/ are deleted (git has them); expect T1 languages (java/python/go) to be walkers too. The `post(result, source)` TS escape hatch remains available but TS/JS needed none. - **Parity evidence (macOS):** `scripts/kernel-parity.mjs` (multiset diff of canonicalized nodes/edges/refs per file, FULL objects) — this repo 353/353 files, excalidraw 643/643 files (10,650 nodes / 10,726 edges / 68,307 refs), plus checked-in torture fixtures (`__tests__/fixtures/kernel-parity/`) covering components/HOCs/styled, zustand-through-middleware, RTK endpoints+hooks, vuex/pinia, fn-refs (incl `this.x` + shadowing gates), value-refs (incl the shadow prune), decorators, enums, type-alias members + tuple contracts, re-exports, JSX. Kept alive in `npm test` by `__tests__/kernel-tsjs-parity.test.ts` (strict full-object compare). - **One decoder bug found by the strict compare:** decode.ts pre-filled `filePath`/`language` on refs; wasm extractors leave them unset (the store denormalizes via `?? filePath`). Fixed — the seam contract is "exactly what extractFromSource returns", not "what the store makes of it". - **Perf (M3 Pro, excalidraw 643 files / 7MB):** extraction single-thread 487ms kernel vs 1,255ms wasm (**2.6×**, identical outputs). End-to-end `init` on an 11-core host moves only ~3.4s → ~3.2s — parse is a small, already-pool-parallelized slice there; the win concentrates on constrained hardware (2-core CI class) and kernel-scale parse (R6). Headroom if R4's dubbo target needs it: arena interning, memoized UTF-16 line prefixes, and skipping wasm-grammar loads in workers for kernel-routed languages (worker cold-start). - **Not yet done (R3 gate):** large-repo parity (vscode-class), full-repo dump-diff through the DB, retrieval invariants, agent A/B, Linux docker + Windows VM parity runs, control-repo perf. Routing stays opt-in (`CODEGRAPH_KERNEL_LANGS`) until then. **→ Done same day, §4b.** ### 4b. R3 — gate PASSED, TS/JS DEFAULT-ON (2026-07-16) Evidence (tools: `scripts/kernel-parity.mjs` now ORDER-sensitive — identical multisets in a different emission order would shift rowids and change resolution — and `scripts/dump-graph.mjs`, natural-key full-DB dumps): 1. **Graph parity — byte-identical, not ≤0.5%:** full `init` dump-diff kernel-vs-wasm: express (13,712 rows), excalidraw (89,898), **vscode (2,378,238 rows)** — all byte-identical. Control repo (flask, Python) byte-identical + timing unchanged. Extraction-level order-sensitive sweeps: repo 352/354 (+2 deferred), express 141/141, excalidraw 643/643, vscode 12,055/12,106 (+51 deferred), 0 diffs. 2. **The one real find — encoding-dependent error recovery:** same grammar bytes (sha-verified parser.c/scanner.h), same tree-sitter core (0.25.10), but error RECOVERY on files with parse errors differs between UTF-8 (native) and UTF-16 (web-tree-sitter) parsing — proven by parsing the divergent vscode file natively in UTF-16, which reproduced the wasm tree exactly. Incidence: 0% (express) / 0.31% (excalidraw) / 0.42% (vscode) of files. **Policy: the kernel defers any file whose tree `has_error()` to the wasm extractor** (`defer:` signal, silent, per-file) — parity by construction on erroring files, 99.6%+ keep the fast path, and the harness fails if deferrals exceed 10% (a broken kernel can't hide). 3. **Retrieval invariants:** kernel-indexed excalidraw — `mutateElement → renderStaticScene` connects end-to-end via explore (callback + react-render + jsx hops shown); synthesized-edge families present (408 jsx-render / 46 react-render / 14 interface-impl / 1 callback); byte-identical DB ⇒ counts equal by construction. 4. **Agent A/B:** byte-identical DBs make the A/B vacuous (identical graph, identical MCP server) — same justification as the #1320–#1322 perf PRs, which shipped on the dump-diff gate. Not burned. 5. **Perf:** vscode init 105.4s → 82.1s (**1.28×**) on the 11-core Mac; excalidraw on a 2-CPU/6GB Linux container (the CI-runner envelope) 6.2–7.1s → 4.3–4.8s (**~1.5×**, n=2 interleaved); Mac excalidraw ≈ neutral-to-slightly-better (parse already a small pool-parallelized slice at 11 cores). Control unchanged. 6. **Platforms:** Linux (arm64 bookworm container, in-container cargo build): all 22 kernel tests green under `CODEGRAPH_KERNEL_EXPECT=1`. **Windows VM: deferred** — VM stopped and `prlctl start` needs Parallels Pro; benign because a missing/broken `.node` falls back to wasm, and the release workflow builds + gates win32 prebuilds. Run the kernel suites on the VM when it's next up. 7. **Suite:** 2,465 tests pass WITH default-on routing — the entire extraction test corpus now exercises the kernel for TS/JS on machines with a staged `.node`. Default routing: `DEFAULT_ROUTED = {typescript, tsx, javascript, jsx}` in `src/extraction/kernel/index.ts`. `CODEGRAPH_KERNEL_LANGS` REPLACES the set; `CODEGRAPH_KERNEL=0` kills. Changelog entry added under [Unreleased]. ### 4c. R4 — Java PORTED + gate PASSED + DEFAULT-ON (2026-07-16) - **Walker:** `codegraph-kernel/src/java.rs` (self-contained, sharing the crate-level docstring/textutil modules) — package namespaces, imports, javadoc, annotations → decorates, type_list inheritance, fields/constants (static-final → constant), enum_constant members, anonymous classes (`` incl. the TS side's 0-based-line quirk, mirrored bug-for-bug), method_invocation calls with the `this.field` unwrap + the `Foo.getInstance().bar()` chain encoding, static-member value reads, method_reference fn-refs (`this::x` / `Type::m`), value refs, and the **full Lombok member synthesizer** (#912: @Getter/@Setter/@Data/@Value/@Builder/ @ToString/@EqualsAndHashCode/@Slf4j-family, taken-member dedup by exact `classQN::name`). Grammar: tree-sitter-java crate 0.23.5; wasm vendored from the SAME tag (94703d5, parser.c sha-matched), replacing tree-sitter-wasms' ^0.20.2 build. - **Parity:** extraction sweeps — gson 262/262, retrofit 341/341, dubbo 4,048/4,048, torture fixture (`__tests__/fixtures/kernel-parity/Torture.java`, in `npm test`). Full-init dump-diffs byte-identical: gson (49,766 rows), retrofit (62,735), **dubbo (441,266 rows)**. All R2/R3 repos re-verified after the fix below. - **The gate caught a REAL cross-language bug:** retrofit's minified website JS exposed that fn-ref dedupe and value-ref self-checks must compare node **ID strings**, not table rows — IDs collide for same-(kind,name,line) nodes (routine in minified one-liners: many `function e` on line 3) and the TS side keys on `${fromNodeId}|${name}`. Fixed in BOTH walkers (`node_ids` per row); this affected tsjs too (latent since R2, never released). - **Benchmark honesty (the §6 expectation was wrong about WHERE the win lands):** dubbo fresh-init on the 11-core M3 Pro is ~FLAT end-to-end (11.3–11.5 wasm → 11.0–11.6 kernel; parse-loop wall 5,020→4,394ms) because that phase's wall is **main-thread-bound** (file reads + result store + SQLite), not worker-CPU-bound — 8 wasm workers already hide extraction CPU behind the main thread on big-core machines. Where worker CPU binds, the kernel delivers: **dubbo on 2-CPU/6GB Linux 27.8–28.6s → 22.3–22.8s (~1.25×)**; excalidraw same envelope ~1.5×; vscode-on-Mac 1.28×. The **cbm-parity Mac headline therefore needs the next lever: decode the kernel's buffers DIRECTLY into store rows** (skip per-node JS object materialization on the main thread) — buffer contract already carries everything; tracked as the top §7a-adjacent follow-up. - **Platforms:** Linux container (arm64): all 23 kernel tests green EXPECT=1; Windows VM still deferred (same fallback rationale as §4b). - Default routing now includes `java`. ### 4e. R5 — Python + Go PORTED + gates PASSED + DEFAULT-ON (2026-07-16) - **Walkers:** `codegraph-kernel/src/python.rs` + `src/go.rs` (the java.rs pattern). Python: decorated_definition docstring/decorator handling (decorates only for bare-identifier decorators — the `call`-kind quirk mirrored), fn-in-class → method, module assignments always `variable` (no isConst hook), from-import binding refs, `self.x` fn-ref candidates as BARE names, attribute callees via the namedChild(1) fallback. Go: receiver methods with `Recv::name` QNs + first-earlier-struct contains edges, type_spec → struct/interface classification (embedding → extends; interface method_elems → method nodes), composite-literal instantiates keeping the package qualifier, top-level var/const initializer walks attributed to the symbol (#693), 2-hop field chains (#1276), `New().Method()` re-encode (#645/#608), GO_SPEC fn-ref layers (literal_element/expression_list fan-out). - **Grammars:** crates tree-sitter-python 0.23.6 (bffb65a) + tree-sitter-go 0.23.4 (3c3775f); wasm vendored from the same tags, parser.c sha-matched (both were 2023-era in tree-sitter-wasms). - **Parity:** extraction sweeps 100% — flask 83/83, django 3,035/3,038 (+3 error-file deferrals), gin 99/99, prometheus 978/979 (+1). Full-init dumps byte-identical: flask (10,833 rows), gin (17,540), **django (360,794)**, **prometheus (213,758)**. Torture fixtures in `npm test`. Even Mac-side init already moves where extraction matters: prometheus 5.7→4.5s, django 9.0→8.7s. On the 2-CPU/6GB envelope (the CI-runner class): **django 22.0→16.7s (1.32×), prometheus 15.0→10.3s (1.46×)**. - Default routing now: typescript, tsx, javascript, jsx, java, python, go. ### 4f. R6 — kernel-scale re-validation (2026-07-17) Fresh init of the Linux kernel in the cg1212 container (2 CPUs / 6GB), current build (R5 kernel + direct-to-store active), CODEGRAPH_SYNTH_TIMINGS: - **Completes, exit 0: 1,586s (26.4min) vs the ~27min #1212/#1323 baseline — no regression** with per-file routing checks, error-file deferral, and the d2s store path live. Graph scale identical: 2,048,664 nodes / 6,405,964 edges (baseline 2.05M/6.4M). - Phase walls: scan 1.3s (70,239 files), **parse-loop 371.9s (6.2m — unchanged)**, fts-rebuild 6.4s, edge-index-recreate 78.9s, callback-synthesis 350.3s, **resolution 1,149.7s (19.2m — the wall, P1's territory)**, maintenance 47.2s. - **The §6 parse expectation (6m → ~2m) was mis-premised:** the Linux tree is 63,810 C/H files vs 422 Python — ~99% C, an UNPORTED T2 language, so the kernel can't touch its parse time. The expectation transfers to the C/C++ port (R7, with the blanking pre-passes staying TS-side per §4). The tree's own Python tooling: 99/99 files byte-parity. - Kernel-scale priority order after this run: **P1 resolution (73% of the wall)** > C/C++ port (23%) > everything else. ### 4d. Direct-to-store decode (2026-07-16) — and where the wall ACTUALLY is Kernel-routed files now ship their flat buffers from the parse worker all the way to the STORE WORKER, which decodes + finalizes them there (`tryKernelExtractRaw` → `ExtractionResult.kernelBuffers` → `KernelStoreBundle` → `decodeKernelBundle`; filter semantics shared via `finalizeStoreBundle`). The main thread's per-file work drops to O(1) + the content hash — it never materializes per-node objects, and both postMessage hops move flat bytes instead of object graphs. Files whose applicable frameworks carry an `extract()` hook keep the decoded path (hooks merge into decoded results); non-writer paths (main-thread store, tests) materialize via `materializeKernelResult`. Byte-identical dumps re-verified on dubbo, excalidraw, express, gson. **Measurement that closes the §4c question:** with the store worker instrumented, dubbo's parse-loop wall is **94% store-writer busy time** (4,202ms of 4,493ms on the kernel arm). The many-core fresh-index wall is the single-writer SQLite ingest — not extraction, not main-thread work. d2s still improves the writer lane ~11% (4,726→4,202ms: buffers skip structured-clone deserialization ON the writer) and frees the main thread, but the remaining cbm gap on many-core medium repos is a STORE-ARCHITECTURE question (their RAM-first design defers all durability). Next levers there (a separate perf arc, not this project): deferred/bulk index builds during the parse phase, multi-file write transactions, buffer→bind without object materialization. Note the #1320-arc post-mortem already measured statement batching and sorted inserts as ~zero on this path — B-tree maintenance is the floor. ## 4. Per-language tracker Tiers: **T1** = mostly `.scm` + mapping config. **T2** = needs bespoke pre/post passes kept in TS (listed). **T3** = not a plain tree-sitter walk (standalone/multi-grammar extractor) — migrate last or never; wasm/TS path is a fine permanent home. The user-facing language contract is `README.md → Language Support` (34 logos incl. Metal, CUDA, Terraform/OpenTofu, Pascal/Delphi). Keep this tracker in sync with it — every README language must have a row here, even the ones that only ride another language's port. Grammar column: `crates.io` = mainstream native grammar crate exists; `vendored` = we ship a rebuilt/patched wasm (ABI-15) and the kernel must compile OUR fork natively — verify parity before porting the language. | Language(s) | Today | Tier | Grammar source | Migration notes / known traps | Status | |---|---|---|---|---|---| | typescript, tsx, javascript, jsx | `languages/typescript.ts`, `javascript.ts` + shared branches | T1 | crates.io | First target. Value-reference edges (#895/#897) and component recognition (#841 forwardRef/memo/styled) must survive — they're extraction-side. Largest test surface; gate is strictest here. **PORTED + GATE PASSED + DEFAULT-ON (§4a/§4b); erroring files defer to wasm per-file.** | ✅ | | java | `languages/java.ts` | T1 | crates.io | Second target; unlocks the dubbo-parity claim. Lombok member synthesis (#912) is a NODE synthesizer hook in extraction (`synthesizeMembers`) — port or keep as TS post-pass. **PORTED incl. Lombok + gate passed + DEFAULT-ON (§4c).** | ✅ | | python | `languages/python.ts` | T1 | crates.io | Third. Decorator extraction feeds framework route detection — parity required. **PORTED + DEFAULT-ON (§4e).** | ✅ | | go | `languages/go.ts` | T1 | crates.io | Third (tie). Value-reference edges ship here too (#897). **PORTED + DEFAULT-ON (§4e).** | ✅ | | ruby, php | dedicated files | T1 | crates.io | Straightforward; PHP property-receiver shapes (#1220/#1251) are RESOLUTION-side, unaffected. | ☐ | | csharp | `languages/csharp.ts` | T1 | crates.io | Plain. | ☐ | | rust, dart, scala, lua, luau, r | dedicated files | T1 | crates.io (luau/r/scala: verify crate freshness vs our wasm) | Long-tail T1; port opportunistically after the big five. | ☐ | | kotlin | `languages/kotlin.ts` | T1½ | crates.io | Expect/actual pairing is synthesis-side (fine); extraction is clean but validate against a KMP repo. | ☐ | | swift | shared + dedicated branch | T1½ | crates.io | **Trap:** in-class property extraction lives in `tree-sitter.ts`'s DEDICATED branch, not `swift.ts` (#1020 — Alamofire went 0→348 props). Gate on Alamofire. | ☐ | | c, cpp | `languages/c-cpp.ts` | **T2** | crates.io | **DONE (R7a, 2026-07-17)** — `ccpp/` walker; ALL pre-passes stayed TS-side via the route-point preParse hoist (+6 new blanks added during gating — see the checklist doc); content-based `.h` C-vs-C++ detection stays upstream at detectLanguage. Parity 0-diff + dump byte-identical on redis/git/fmt/protobuf/ALS. | ☑ | | metal, cuda | dialects over the cpp grammar | **T2** (rides c/cpp) | crates.io (cpp) | **DONE (rides R7a)** — `.metal`/`.cu`/`.cuh` map to 'cpp' and their blanks run in the hoisted preParse (filePath rides along for the extension gates); hoist-parity pinned in kernel-ccpp-parity.test.ts + the metal/cuda suites. | ☑ | | objc | `languages/objc.ts` | T2 | crates.io | Rides the c-cpp trap family; RN bridge extraction feeds `rnCrossPlatformEdges` (synthesis-side, fine). | ☐ | | arkts | `languages/arkts.ts` | T2 | **vendored** (harmony-contrib) | Dot-prefixed refs + decorator-gated matching fixed 36,840 wrong edges — that logic must port exactly or stay TS-side. Compile our grammar fork natively. | ☐ | | pascal | `languages/pascal.ts` | T2 | **vendored** | Paired with dfm-extractor (T3); `extractPascalDefProc` indexed lookups. | ☐ | | vbnet | `languages/vbnet.ts` | T2 | **vendored, patched + external scanner** | Our wasm is a patched grammar WITH a C external scanner — the kernel must build that scanner; ts-cli 0.24 dropped `\p{...}` classes during the original build (#1164). Highest grammar-build risk of any language. | ☐ | | cobol | `languages/cobol.ts` | T2 | **vendored fork** | Paragraph-extent reconstruction + copybook resolution are extraction logic (#1161, CardDemo 43/44). Port carefully or keep TS post-pass. | ☐ | | erlang | `languages/erlang.ts` | T2 | **vendored (WhatsApp/ELP)** | npm `tree-sitter-erlang` is HIJACKED — never source from it (#1165). gen_server dispatch is synthesis-side (fine). | ☐ | | nix | `languages/nix.ts` | T2 | **vendored (ABI-15 rebuild)** | Option-path synthesizer is synthesis-side; the `===`-always-false → `.equals()` lesson (#1190) is wasm-binding-specific and disappears natively — still gate on nixpkgs (44k files). | ☐ | | solidity | `languages/solidity.ts` | T2 | **vendored** | `modifier_invocation` outside body walk (#1170) is extraction-side; port it. | ☐ | | terraform | `languages/terraform.ts` | T2 | **vendored** | `:`-scoped refs for module-boundary bridging (#1173); metadata does NOT persist — re-read source (#1174). | ☐ | | cfml, cfscript, cfquery | `cfml-extractor.ts` + 3 grammar files | **T3** | **vendored ×3** | 3-grammar family with BOM-sensitive dialect sniffing (#1118/#1153–55). Leave on wasm until the very end, possibly forever. | ☐ | | svelte, vue, astro, liquid | standalone extractors | **T3** | n/a (custom/embedded parsing) | Not tree-sitter walks. Permanent TS home is acceptable — file counts are small and these repos are small. | ☐ | | dfm (Delphi forms), razor, mybatis XML | standalone extractors | **T3** | n/a | Same as above. mybatis pairs with a synthesis pass (fine). | ☐ | **Do-not-regress invariants during any port** (extraction-side, will show up in the gate): node metadata is re-read from source, never persisted; parse commits stay in FILE ORDER (#1015); `MAX_FILE_SIZE` skip; generated-file detection; `CODEGRAPH_PARSE_WORKERS` semantics; framework `extract()` hooks keep running TS-side per file after the kernel pass. ## 5. Equivalence gate (run per language, no exceptions) Byte-identity vs hand-written extractors is NOT expected — the gate is behavioral parity: 1. **Graph parity:** fresh-index 3 real repos (small/medium/large for the language) on wasm-path vs kernel-path builds. Dump with the `dump-graph.mjs` pattern (natural keys). Node/edge/ref deltas ≤0.5% AND every diff category manually classified (the 13-edge supertype-visibility bug this week was caught exactly this way — small diffs are real). 2. **Retrieval invariants:** the language's canonical flows still connect end-to-end in `codegraph_explore` (playbook: `docs/design/dynamic-dispatch-coverage-playbook.md`); node counts stable; synthesized-edge spot-check. 3. **Agent A/B non-regression** per the standard methodology (CLAUDE.md): `--model sonnet --effort high` ALWAYS, ≥2 runs/arm, pre-warmed daemon, `CODEGRAPH_NO_PROMPT_HOOK=1`, forbid subagent delegation in the prompt. 4. **Perf:** fresh-index improves on the language's repos; a NON-migrated control repo is unchanged; suite green; Linux docker + Windows VM passes for platform-sensitive bits. ## 6. Rollout order and expected wins > **Executed 2026-07-16/17; outcomes vs these expectations are in §4a–§4f.** Two > expectations below were corrected by measurement: (2) the dubbo-on-Mac headline is > store-writer-bound, not extraction-bound (§4c/§4d — the win lands on the low-core > envelope instead); (4) cg1212 is ~99% C, an unported T2 language, so its parse > expectation belongs to the C/C++ port (§4f). 1. **TS/JS/TSX/JSX** — most indexed files in the funnel; excalidraw 3.3s → ~2.3s expected. 2. **Java** — dubbo 11.1s → ~7.5s expected (**the cbm-parity headline**). 3. **Python, Go** — rounds out ~90% of real-world indexed files. 4. Kernel-scale re-run in the cg1212 container after (2): parse 6.0m → ~1.5–2m expected. 5. Long tail opportunistically; T3 possibly never — that's fine by design. Measurement discipline (hard-won this week — do NOT relearn these): - Profile first. Ideas killed by measurement this week: sorted-chunk inserts (zero), statement-batching the persist (zero — B-tree maintenance is the cost), RAM-disk/ in-memory DB build (SLOWER — fastInit already writes at page-cache speed). - `CODEGRAPH_SYNTH_TIMINGS=1` now emits full phase walls (`[phase-timing]`) + pool/batch timings. UI distorts phase walls — pipe stdout away. - Check host load before timing (iOS simulators inflated every phase ~30%); the Monitor-on-loadavg pattern (fire <3.5) gives clean windows. - `grep` is aliased to ugrep and silently treats `callback-synthesizer.ts` as binary — use `grep -a`. ## 7. AFTER the kernel: the follow-on roadmap (in order) ### 7a. Kernel-scale resolution speed — NOW THE TOP OPEN PERF ITEM Confirmed by the R6 run (§4f): resolution is 19.2min of the 26.4min Linux-kernel wall (73%) — ~~sequential BY DESIGN in the 2-CPU container (the resolver pool requires ≥4 cores to engage)~~ **(premise corrected in §7a.1: it was pooled all along)**. Parse is 6.2min (23%) and belongs to the C/C++ port (R7a). Steps: re-run cg1212 validation on ≥4-core allocation (pool + parallel synthesis #1321/#1322 engage — this first measurement is cheap and may reshape the whole problem); profile; likely levers: worker count scaling, batch size at scale, `warmCachesYielding` on multi-GB DBs. Target: kernel <10min on a normal 8-core host. #### 7a.1 First measurement round (2026-07-17) — the arc reshaped The cheap first measurement was run and did exactly what it was for: it invalidated the premise and surfaced two structural defects that now gate any speed work. - **Premise correction — resolution was NEVER sequential in cg1212.** Pool sizing (`resolver-pool.ts` `tryCreate`: `min(os.cpus().length − 2, 6)`, engage at ≥2) uses `os.cpus()`, which is **cpuset-blind** — inside the 2-CPU container it saw the Docker VM's 8 CPUs and ran **6 workers time-slicing 2 cores** (r6 log: 6× `worker open`, 14k pool-timing lines). A real <4-CPU host (`os.cpus()` < 4) gets no pool at all. This also explains why the earlier "19.5m sequential" and R6's 19.2m match: same 6-on-2 topology. `os.availableParallelism()` (cgroup/affinity- aware) is the honest sizing input — candidate fix rides item (2) below. - **Failure 1 — container at 8 real cores / 7GB: cgroup OOM (`oom_kill=5`, `OOMKilled=true`), silent `EXIT=1`** (SIGKILL inside the liftoff re-exec surfaces as code 1, no output). Died mid-parallel-synthesis, 4 passes in. At 8 real cores all 6 workers hold peak anon memory *simultaneously* — the 2-core runs survived only because time-slicing kept concurrent peak lower. **The pool sizes by cores only; there is no memory-aware term and no size knob** (`CODEGRAPH_NO_PARALLEL_ RESOLVE` is all-or-nothing). - **Failure 2 — WAL blowup at kernel scale: 22.2GB WAL on a 4.6GB DB** (container, at death; the Mac-native attempt was watchdog-killed at 5GB free disk with the WAL already 2.8GB at resolution *start*). Mechanism: the pooled resolution/ synthesis superphase writes continuously while 6 workers hold overlapping read snapshots — checkpointing can never truncate past the oldest reader, so the WAL accretes ~the phase's entire write volume. Invisible on medium repos (writes are ~100s of MB); at kernel scale it is a ~5× disk blowup and a page-cache pressure source that feeds Failure 1. The #1231 WAL valve doesn't contain it (valve checkpoints can't truncate past pinned readers either). Fix direction: workers recycle their DB connection between batch rounds (release snapshots at a checkpoint barrier), or an equivalent writer-coordinated `wal_checkpoint(RESTART)` window; instrument to confirm the starvation point before building. - **What did move: parse-loop 371.9s → 199.2s (1.87×) at 2→8 cores** (container, clean window) — already riding the single-writer store floor (§4d), so the C/C++ port (R7a) will cut worker CPU but the parse wall won't drop below the writer lane on many-core hosts. - **Parity spot-check:** Mac-native post-parse node count 2,048,675 vs R6's final 2,048,664 (+11 across 2.05M; post-parse vs post-maintenance and a contended run — not a parity gate, just no red flag; the dump-diff gates remain the authority). - **Host truth for the target claim:** the dev Mac is 8 logical cores / 24GB — literally the P1 target class. Its constraint is transient DISK (fresh kernel- scale init currently needs ~25GB+ free for tree+DB+WAL until the WAL fix lands). **Revised P1 order: (1) WAL containment → (2) memory-aware, cgroup-honest pool sizing → (3) re-run the 8-core measurement (container at ≥12GB or the Mac with disk headroom) → then profile what remains.** The <10min-on-8-cores target stands. #### 7a.2 P1 items (1)+(2) SHIPPED 2026-07-17 — the implementation arc (#1332–#1335) Four PRs, each carrying its measurement; the arc took three failed/diagnostic kernel-scale runs to get right, and every failure taught a design fact: | Run (2c/6GB unless noted) | Build | Outcome | |---|---|---| | R6 baseline | pre-P1 | 26.4min, EXIT 0; WAL unbounded (mid-run peak unmeasured); pooled 6-on-2 (cpuset-blind) | | run 1 | #1332 hook | **EXIT 137 (OOM)** — WAL 22.2GB, 0 of 5.4M frames ever backfilled; futile 20-pass parks amplified memory churn | | diagnostic | +latch/debug | EXIT 0, ~24min; pool KILLED by mis-measured 57MB cgroup budget → exposed **sequential resolution 853s vs 1,150s pooled** and cFnPtrEdges = 306s of synthesis's 358s | | instrumented | +sizing fixes | EXIT 0, **21.6min (R6 −18%)**; parse floor restores 373.5s; passives complete but the FILE marched 361→721MB → named the wrap-never-happens gap; peak 17.2GB | | record (first attempt) | #1335 | **EXIT 1: "database is locked"** — the timer-path truncate won the lock race after the recreate's multi-GB burst and stalled the writer past its 5s busy_timeout → truncate is barrier-only now (#1336). Bonus data: recreate 7.9s (vs 68–95s) once the WAL stays folded | | **record** | **#1336** | **EXIT 0, 20.4min (R6 −23%); WAL peak 1.57GB (−14×); counts byte-exact 2,048,664/6,405,964.** parse 354.9s · resolution 812.5s · synthesis 329.0s · recreate 57.5s · maintenance 43.5s | | **8-core retry (8c/7GB)** | **#1336** | **EXIT 0, NO OOM — 18.3min; WAL peak 1.09GB; pool sized 4 by the memory term (ap=8, budget 5.1GB, db 4.1GB); counts byte-exact.** parse 208.7s · resolution 835.9s · synthesis 338.7s | **The 8-core verdict (the question P1 set out to ask): 18.3min vs the <10min target — infrastructure fixed, speed target NOT met, and the gap is now precisely characterized. Resolution is CORE-INVARIANT at kernel scale: 835.9s pooled-4-on-8 ≈ 812.5s sequential-on-2 — worker parallelism buys nothing, so the bottleneck is the per-ref main-thread path (admission + persist + per-ref resolver work), not topology. Of the 18.3min, ~14min is core-invariant resolution+synthesis. Next levers, in order: (a) profile the per-ref path inside resolution (the 812–836s floor), (b) `cFnPtrEdges` (306s, 86% of synthesis — parallelize/window WITHIN the pass), (c) the R7a C/C++ port (parse 209s → kernel-native). 4× cores currently buys only 2min end-to-end (20.4 → 18.3) because parse is the only core-scaling phase left.** **Design facts these runs established (each now enforced in code + tests):** 1. **WAL backlog and WAL file are different resources.** Passive backfills bound the backlog; the FILE only stops growing when a commit finds zero reader marks — observed never in practice. Containment = backfill + **TRUNCATE at a parked barrier** (the one guaranteed no-reader window) + a raw file-size trigger at 4× the soft cap (#1334/#1335). Dubbo: 251MB → 69MB peak, dumps byte-identical under aggressive fold cycling. 2. **cgroup v2 `memory.current` counts reclaimable page cache** — post-parse it read 57MB free on a 6GB box and silently disabled the pool. `inactive_file` is credited back (#1335); the same box reads 4.4GB. 3. **The pool loses to sequential at 2 real cores** (853s vs 1,150s resolution; cold worker caches + serialization + time-slicing exceed the parallelism), and pooled synthesis is Amdahl-bound by `cFnPtrEdges` (306s of 358s) at kernel scale. Sizing: `min(availableParallelism − 1, 6)` + memory term + `CODEGRAPH_RESOLVE_WORKERS` knob (#1333/#1335); ap=2 → sequential by choice. 4. **Parse needs ≥2 workers even on 2 cores** (1 worker = +34%; main + store worker don't fill the second core). Floored (#1335): 373.5s ≈ the 369s oversubscribed baseline, at a fraction of the memory. 5. **Silent failure modes burned three 25-minute cycles**: give-ups were verbose-gated, sizing's null path logged nothing, the timer path logged nothing. All valve/sizing decisions now print under `CODEGRAPH_SYNTH_TIMINGS` / `CODEGRAPH_WAL_VALVE_DEBUG` — the armed line answers "is it even alive" in one glance. **New synthesis lever surfaced:** `cFnPtrEdges` is 86% of kernel-scale synthesis wall — parallelizing WITHIN that one pass (or windowing its scan) is worth more than pooling all 36 passes. Filed under the next P1 profiling round. #### 7a.3 Batch-loop profile + de-quadratic round (2026-07-17, #1339) `CODEGRAPH_RESOLVE_PROFILE` (shipped in #1339: per-outcome resolveOne histogram + loop-stage attribution) overturned the arc's founding assumption — resolveOne owns only **~93s** of the ~433s kernel-scale batch loop. Stage attribution and what happened to each: | Stage | Before | After #1339 | Note | |---|---|---|---| | countGuard | 93.9s | **0.0s** | per-batch COUNT(*) was O(remaining) — replaced by summed SQLite `changes` (zero-removals IS the runaway signal; real COUNT only arbitrates the suspicious path) | | read | 54.6s | 57.2s | keyset replaced OFFSET, but the cost is row MAPPING (5000-row materialization + candidates JSON), not prefix-walking — theory falsified, keyset kept as hygiene; lever = leaner row mapping | | backpressure | 111.2s | 121.2s | DB-scaled caps didn't help: the fold tax is TOTAL checkpoint I/O (write set is cold pages, not re-dirtied hot ones) — a disk-I/O floor ≈ WAL bytes written | | settle (resolveOne) | 85.7s | 88.0s | the real work; exact-match 3.17M×13µs=41s is the biggest legit class | | inserts/deletes/marks | ~84s | ~84s | B-tree floor (#1320 post-mortem) | **2c/6GB envelope: 26.4min (R6) → 20.4 (#1336) → 19.3min (#1339), counts byte-exact every run; dubbo dump byte-identical.** The 8-core re-run post-#1339 is pending (est. ~17.5min from the stage arithmetic). Remaining levers by size: parse 351s→R7a C/C++ port; cFnPtrEdges 306s; backpressure 121s (I/O floor — shrinks only by writing fewer bytes); settle 88s; read-mapping 57s. #### 7a.4 cFnPtrEdges round (2026-07-17, #1341) — 2.07× standalone, probe-driven Iterated with a STANDALONE in-container probe against the live kernel DB (readonly; ~4min/cycle instead of 25-min inits) with per-sweep sub-timings (`CODEGRAPH_SYNTH_TIMINGS` prints the `cFnPtr sub:` line): | Iteration | Standalone total | What moved | |---|---|---| | baseline | 278.8s | attribution: E 112s, D 92s, strip 71.8s (4.4×/file), C 41s | | regex hoists + D field-name pre-gate + incremental line count | 249.3s | D −24s | | budget-aware strip cache (first cut) | — | **thrash lesson: a partial LRU on cyclic sweeps ≈ 0% cross-sweep hits** — cap ~61k AND cap == files.length both lost (includes push the working set over) | | all-or-nothing cache + 5% slack | 187.8s | strips exactly 1.0/file; `getNodesInFile` theory killed (10s, not 127s) | | `sliceLines` → split-once-per-file | **134.8s** | ~1.6M full-file splits eliminated (D 46→20.5s, E 94.5→69.1s) | **Identity proof at full scale:** optimized edge set (merge-dedup + canonical sort, 274,762 edges) SHA256 `21c2a971…` == the pre-optimization edges extracted from the live kernel DB — this pass never runs on the dubbo gate repo (C-gated), so the DB comparison is the right gate. Suite 2,491. **In-run validation (2c/6GB): total 17.6min (from 19.3; −33% cumulative vs R6), synthesis 336→251s, counts byte-exact, WAL 1.09GB.** Honest caveat: the full strip cache did NOT engage in-run at 6GB (mid-run memory budget below the 2×-cache safety threshold → deliberate fallback to the 128 floor; strips 283k, costing ~60s vs the probe) — the memory-safe degradation working as designed. Boxes with headroom get the full 2.07×; the 6GB envelope gets the algorithmic wins only. **Levers remaining, re-ranked:** parse 338s (R7a C/C++ port — the last big rock) > backpressure ~120s (checkpoint I/O floor) > E-scan 69–93s (approaching honest regex work over 1.5GB) > settle 88s > read-mapping 57s. #### 7a.5 8-core re-run, post-R7a (2026-07-17) — 16.4min; the 8c gap is now all resolution Same provisioning as the §7a.2 retry (cg1212 at cpuset 0-7 / 7GB), the deployed R7a build, fresh init of the v7.2-rc2 tree: **EXIT 0, envelope 981s = 16.4min** (pre-R7a 8c record: 18.3min — and that was the smaller pre-blank graph). Counts **2,048,295 / 6,406,933 == both 2c arms**; WAL peak 1.34GB (same contained regime as 1.09–1.57GB records). Phases: parse-loop **202.6s** (pre-R7a all-wasm 8c: 208.7s — both sit ON the single-writer store floor, so 8c parse is writer-bound, not extraction-bound) · resolution superphase **715.0s** (was 835.9s) containing callback-synthesis **257.4s** (was 338.7s) and edge-index-recreate 52.0s · maintenance 47.6s. The −1.9min vs the record is the post-#1336 rounds (#1339 countGuard, #1341 cFnPtr, R7a native parse + defer-reuse) landing at 8c for the first time. **Consequence for the <10min target:** ~12 of the 16.4 minutes are the core-invariant resolution superphase. Deferral cuts can't materially move the 8c envelope (parse is already at the writer lane); they remain queued for graph richness + the 2c/low-core envelope. The 8c target now lives or dies on the per-ref resolution path (§7a.2's lever (a)). #### 7a.6 Per-ref path measurement round (2026-07-18) — fresh tables, two falsifications, two live levers Fresh `CODEGRAPH_RESOLVE_PROFILE` tables on the round-2 build (v7.2-rc2 tree, cg1212), then two cache experiments run against them — both killed by measurement, code reverted same-day; this section is what survives. | stage (batch loop) | 2c sequential (clean host) | 8c pool-4 | |---|---|---| | read | 37.0s | 33.9s | | settle (resolveOne) | 79.7s | **3.6s** | | backpressure | 138.3s | 121.9s | | createEdges | 3.4s | 7.6s | | insertEdges | 33.8s | **55.3s** | | deletes | 37.7s | **118.8s** | | marks | 5.3s | 6.5s | | **loop total** | **339s** | **357s** | 2c: superphase 645s (loop + synth 251.6s [cFnPtr ~230: E 95.0 + strip 78.5 at n=283k, budget-declined again + C/D 88.8] + recreate 54.5); envelope **16.5min — the new 2c record** (the 17.1 r2-gate figure carried host contamination). Settle decomposition: exact-match 35.1s @ 11µs × 3.17M, import 16.9s, fail:calls 9.2s × 1.63M. 8c: superphase 655.5s (+ synth 242.6 + recreate 56.1), envelope 14.95min — **n=2 range 15.0–16.4min with the morning's run; report ranges, never single runs on this box.** 8c parse 178.5s: round 2's deferral cuts DID move the 8c parse wall (202.6 → 178.5) — §7a.5's "writer-floor won't move" prediction was partly wrong. - **The pool double-buffer WORKS.** settle 3.6s at 8c — the workers absorb the entire 3.17M exact-match population (12–17s per worker, parallel). §7a.2's "resolution is core-invariant" framing is superseded: the 8c cost was never resolveOne. - **THE 8c anomaly — writes-under-readers:** deletes 37.7 → 118.8s (+81) and insertEdges 33.8 → 55.3s (+22) with 4 readonly workers attached. Main-thread B-tree writes run ~3× slower under the pool. Mechanism UNPROVEN — candidates: page-cache competition (4 × 32MB worker caches + reads), WAL read-through depth while readers hold positions, wal-index lock contention. Next probe: instrument (per-op delete timing vs worker activity windows), then either shorten reader hold-times (worker connection recycling at the barrier — §7a.1's original fix direction, never built) or cut delete volume. Potential ≈ −100s at 8c. - **Killed by measurement #1 — nameCache scaling (the 5k-thrash theory).** v1: budget-scaled classic LRU (~478k entries) → settle 102.7s, exact-match 52.7s @ 17µs — WORSE; delete+set-per-get churn on a huge Map plus resident-array GC ate more than the SQLite statements saved. v2: mutation-free second-chance cache at 250k → exact-match 37.9s @ 12µs ≈ the 35.1s baseline. Verdict: the 11µs is NOT refetch overhead — the 5k cache already holds the true Zipf head, the tail doesn't repeat enough to cache at any size, and the floor is the per-ref JS around one indexed lookup. Both variants byte-correct (counts 2,049,153/6,413,518; git dumps byte-identical) — correctness was never the issue. Code reverted; the second-chance design lives in this entry if a big-RAM-validated attempt ever wants it. - **Killed by measurement #2 — lazy `candidates` JSON parse:** read stage 37.0 → 38–40s across variants (flat). The eager parse was never the read cost; row materialization + the statement walk is. Reverted. - **Levers, re-ranked:** writes-under-readers probe (+102s at 8c — the single biggest attributed delta) > cFnPtr NATIVE SITE EXTRACTION (synthesis ~230s: emit fn-ptr assignment sites from the C walker at parse time for the now-66% kernel-routed population — E-scan 95s + reads + much of strip 78s die; needs bug-for-bug regex-semantics parity in Rust and the raw-vs-preParsed scan-text question settled first) > backpressure byte volume (~122–138s I/O floor; value-neutral schema interning is migration-wide — parked) > recreate 54–70s. - Box note: cg1212's 6–7GB deliberately degrades the cFnPtr strip cache (~80s paid in-container that a 24GB target-class box gets back free) — container numbers UNDERSTATE the true 8-core-class target. #### 7a.7 Writes-under-readers probe + fix (2026-07-18) — WAL depth named, worker connection recycling shipped Five discriminating runs (all 8c pool-4 unless noted, same tree/build family; each ~16min), then the fix in two cadence iterations: | run | deletes | insertEdges | read | backpressure | settle | superphase | |---|---|---|---|---|---|---| | pool-4 baseline | 118.8 | 55.3 | 33.9 | 121.9 | 3.6 | 715.0 | | pool-OFF | 42.6 | 38.3 | 32.6 | 120.1 | 108.5 (main) | 685.9 | | workers=2 (dose) | 58.9 | 54.0 | 23.9 | 174.7 | 10.3 | 670.0 | | v2 caches @8c | 108.0 | 50.3 | 31.4 | 168.0 | 3.9 | 687.3 | | valve 64MB | **56.5** | **27.8** | **16.8** | 297.2 | 3.8 | 739.2 | | **recycle c25** | 99.8 | 42.9 | 32.7 | 148.8 | 3.7 | 663.3 | | **recycle c8 (SHIPPED)** | 104.3 | 47.8 | 32.5 | 127.6 | 4.0 | **633.6** | - **Mechanism proven: WAL read-through depth under reader pins.** Pool-off restores writes on identical hardware (deletes 118.8 → 42.6); the dose scales with reader count (knee between 2 and 4); the aggressive valve — which forces a shallow WAL — recovers deletes/inserts/read to their floors (56.5/27.8/16.8) but overpays +129s in full-park folds. Reconciliation: checkpoints run in every topology, but READERS PIN their progress — the WAL runs deep exactly when workers are attached, and deep-WAL page operations tax the writer everywhere (including the unattributed between-stage spans, recreate, and synthesis reads). - **v2-at-8c falsified the cache resurrection** (deletes 108.0 ≈ baseline): name-lookup traffic is long-tail-dominated — uncacheable at any capacity — so reader traffic can't be reduced by caching. The caching family is triple-dead (2c settle, 8c writes). - **The fix: worker connection recycling at the pool-idle boundary** (`ResolverPool.recycleWorkers` + `QueryBuilder.rebind` + a cadence call at the double-buffer's worker-idle point). Workers close/reopen their read-only connections every 8 batches (~40k refs) — reopens are sub-millisecond, resolver caches survive (only prepared statements re-prepare), and the existing checkpoints advance instead of parking. Cadence 25 → 8 iterated by measurement; 8 wins via diffuse gains (backpressure −21, recreate 59.7 → 45.3). Attributed deletes stay ~100 (the WAL still re-deepens between recycles — the valve's 56.5 floor needs continuous shallowness), but the SUPERPHASE captures the true win: **715.0 → 633.6s (−11.4%)**; envelope best-of **14.8min at 8c** (890s; band across the day's runs 14.8–16.4). Byte-neutral: git dumps byte-identical old-vs-new, linux dump sha `6dd1185b…` reproduced, counts 2,049,153/6,413,518 every run, suite 2517 green. 2c unaffected by construction (no pool → no recycling). - Levers after this round: cFnPtr native site extraction (~230s synthesis, §7a.6 ranking stands) > continuous-shallow WAL (close the remaining ~45s gap between recycling's ~100s deletes and the valve's 56.5 floor without full-park folds — e.g. passive-checkpoint nudges at the recycle boundary) > backpressure byte volume > recreate. #### 7a.8 cFnPtr calibration round (2026-07-18) — the 230s decomposed; fuse-then-link is step 1 Three quick measurements before any port, two of them killing assumptions: - **JS strip rewrite: killed by measurement.** stripCStyle's `split('')` looked like allocator pathology; a segment-builder rewrite (byte-identical, pinned by `__tests__/strip-cstyle-differential.test.ts` — kept as the oracle for any future rewrite) measured **1.0×** on 15.1M chars of linux C. V8's scan rate is the honest cost: **~73MB/s**, and 283k strips ≈ 4 strips/file × ~20KB × that rate ≈ the observed 78s. The strip lever is the **4× redundancy** (all-or-nothing cache declined at 6–7GB → every sweep re-strips), not the scanner. - **E-stage regexes alone: ~46MB/s → ~30s of E's 95s.** DISPATCH_RE + ARRAY_DISPATCH_RE over stripped kernel/ text yield 1,112 matches / 15.1M chars. The other ~65s is per-match logic, body slicing, lineAt, and getNodesInFile. A native regex scan alone caps at −30s. - **Calibrated attack for the ~230s, re-ordered:** 1. **Fuse-then-link refactor (TS, step 1):** one per-file extraction pass computes strip ONCE and collects {function macros, object macros, defined sets, struct fields, raw registration matches, raw dispatch matches, per-function declared-receiver types}; a text-free global linking pass then builds registries and edges. Kills the 4× strip (−~58s) + repeated reads (−~8s) + part of E's slicing overhead. Parity discipline: collectors insert in the same file order the global passes iterate today (Map insertion order = current registry order), FANOUT_CAP and match-evaluation order preserved per function; gate = edge-set hash vs the live kernel DB (§7a.4 probe) + linux dump sha. The chain/receiver resolution must be pre-collected as per-file declared-type tables so linking never touches text. 2. **Native per-file extractor (step 2):** the same boundary then accepts a Rust implementation of the per-file pass (raw text in, collected records out — no preParse interaction; the synthesizer reads raw disk text). Bug-for-bug regex semantics required; worth it only for the remaining ~100s of per-file scan+logic after step 1 lands. - Note for step 2 sizing: strip at native memchr rates (~500MB/s+) would be ~6-10s for the full corpus even before redundancy cuts — but marshal (UTF-16↔UTF-8 across napi) eats seconds at GB scale; batch the calls. ### 7b. Arc 3 — graph richness (forensics-backed; adopt cbm's real extras, skip inflation) Priority order, each gated by the standard A/B + node-explosion probes: 1. **Test→subject edges** (first-class `tests` edges at index time; we compute covering tests at query time today; cbm materializes 14.8k on dubbo). Feeds test-gap detection (Lite headline) + Pro risk signals. Cheapest, do first. 2. **Per-node code metrics** (complexity, cognitive, `is_test`, `is_entry_point`, param counts) — computed during extraction (the kernel makes this nearly free — design the buffer contract with a metrics slot!). Feeds Pro risk-ranking verdicts + explore ranking de-noise. 3. **Read/write distinction on references** (`USAGE` vs `WRITES`). The measured agent frontier ("who mutates this state" — the canvasNonce class). HIGHEST value, HIGHEST risk: scope to exported/state-relevant symbols; the tracking-every-local explosion is the known failure mode (#999/#1212 class). Full validation methodology. 4. **Exception-flow edges** (`raises`) — throw→handler; moderate. 5. **Doc Section nodes** (markdown headings as nodes, linked to code) — maps onto Pro's synced-business-docs story. 6. **IaC nodes** (k8s/docker/kustomize as graph nodes with cross-references). NOT worth chasing (verified in their cache schema): per-variable node inflation (85% of their node count), DB size parity (theirs is ~60% allocation slack), similarity vectors in the core engine. ### 7c. Deferred/parked (needs explicit approval before starting) - Single-file SEA binary (distribution polish; zero speed). - Team-shared graph artifact (cbm's `graph.db.zst` idea — good, but design it for the Pro shared-worker story, not as an OSS clone). - Full native rewrite: rejected with data — the moat (2,444 tests, byte-identical determinism, this week's two caught-by-gate bugs) lives in the TS reference. ## 8. Context for the executing agent - House rules live in `CLAUDE.md` (repo root) — the retrieval invariants, A/B model policy, release rules (never `npm publish`/push tags), changelog format. - This week's PR trail tells the story and the style: #1305, #1320 (checkpoint deferral + double-buffered persist; THE invariant: batch k+1 READS batch k's edges — supertype walks — so edges insert before fan-out), #1321 (parallel synthesis via pool reuse, registry order = merge order), #1322 (bulk edge load, identity index stays), #1323 (kernel-scale hardening: skip-don't-retry-on-main >1.5M nodes, yielding index recreate). - Every perf PR shipped byte-identical with the dump-diff gate; keep that bar. - Competitive context (validated 2026-07-16): cbm wins medium-repo fresh index 1.55–1.8× (their RAM-first design); we win sync 2.4–2.8×, agent A/B (their 14 tools drew ZERO calls in 8/8 runs), call-graph density 1.3–2.3×, and the constrained-hardware envelope (Linux kernel on 2-CPU/6GB: we complete in 27min, they die at 0.16% — their speed IS their memory floor). The kernel project closes their last number without giving up any of ours.