docs: regenerate the module graph after the master merge

The merge composed master's new package edges with this branch's
dsh-timeout dependency removal; the checked-in graph had neither.

docs/module-graph.md

@@ -295,7 +295,6 @@ flowchart TD
   pkg_storage_sqlite --> pkg_storage
   pkg_subprocess_local --> pkg_invariants
   pkg_subprocess_local --> pkg_subprocess
-  pkg_subprocess_local --> pkg_timeout
   pkg_llm_deepseek --> pkg_invariants
   pkg_llm_deepseek --> pkg_llm
   pkg_llm_deepseek --> pkg_timeout
@@ -901,7 +900,7 @@ flowchart TD
 | [`storage-domain`](../packages/storage/storage-domain) | `storage` | [`invariants`](../packages/support/invariants), [`storage`](../packages/storage/storage) |
 | [`storage-json`](../packages/storage/storage-json) | `storage` | [`invariants`](../packages/support/invariants), [`storage`](../packages/storage/storage) |
 | [`storage-sqlite`](../packages/storage/storage-sqlite) | `storage` | [`invariants`](../packages/support/invariants), [`storage`](../packages/storage/storage) |
-| [`subprocess-local`](../packages/subprocess/subprocess-local) | `subprocess` | [`invariants`](../packages/support/invariants), [`subprocess`](../packages/subprocess/subprocess), [`timeout`](../packages/util/timeout) |
+| [`subprocess-local`](../packages/subprocess/subprocess-local) | `subprocess` | [`invariants`](../packages/support/invariants), [`subprocess`](../packages/subprocess/subprocess) |
 | [`llm-deepseek`](../packages/llm/llm-deepseek) | `llm` | [`invariants`](../packages/support/invariants), [`llm`](../packages/llm/llm), [`timeout`](../packages/util/timeout) |
 | [`llm-pi-ai`](../packages/llm/llm-pi-ai) | `llm` | [`invariants`](../packages/support/invariants), [`llm`](../packages/llm/llm), [`timeout`](../packages/util/timeout) |
 | [`session`](../packages/core/session) | `core` | [`brand`](../packages/util/brand), [`invariants`](../packages/support/invariants), [`llm`](../packages/llm/llm), [`scope`](../packages/core/scope) |